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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs465399 chr20:44368918 G/C WFDC3 chr20:44376583-44420571:- 0.88 6.51 2.96E-8 Box Plot
ACC rs465808 chr20:44366830 T/C WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs4658434 chr1:245151982 C/T EFCAB2 chr1:245133007-245290466:+ 0.62 5.72 5.32E-7 Box Plot
ACC rs4660306 chr1:45978675 C/T CCDC163P chr1:45959538-45965724:- 0.6 5.3 2.36E-6 Box Plot
ACC rs466668 chr20:44366394 A/C WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs467129 chr20:44371905 G/T WFDC3 chr20:44376583-44420571:- 0.88 6.16 1.09E-7 Box Plot
ACC rs467309 chr20:44365773 G/A WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs4706240 chr6:86273757 A/G SNHG5 chr6:86370668-86388454:- 0.68 5.29 2.52E-6 Box Plot
ACC rs4707209 chr6:86229369 C/A SNHG5 chr6:86370668-86388454:- 0.68 5.09 4.95E-6 Box Plot
ACC rs4707211 chr6:86232710 G/A SNHG5 chr6:86370668-86388454:- 0.74 8.39 3.05E-11 Box Plot
ACC rs4707212 chr6:86234384 C/T SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs4714638 chr6:42917017 A/G PEX6 chr6:42931608-42946958:- 0.61 5.87 3.08E-7 Box Plot
ACC rs4714644 chr6:42934818 T/C PEX6 chr6:42931608-42946958:- 0.59 5.54 1.02E-6 Box Plot
ACC rs4717239 chr7:64536853 C/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs4717244 chr7:64734122 T/C INTS4L1 chr7:64601603-64694600:+ 0.64 5.08 5.21E-6 Box Plot